java.lang.Object
- org.jmol.adapter.smarter.Structure

public class Structure
extends java.lang.Object

Field Summary

Fields
Modifier and Type	Field	Description
`int[]`	`atomStartEnd`
`BS[]`	`bsAll`
`int`	`endChainID`
`java.lang.String`	`endChainStr`
`char`	`endInsertionCode`
`int`	`endSequenceNumber`
`int[]`	`modelStartEnd`
`int`	`serialID`
`int`	`startChainID`
`java.lang.String`	`startChainStr`
`char`	`startInsertionCode`
`int`	`startSequenceNumber`
`int`	`strandCount`
`java.lang.String`	`structureID`
`STR`	`structureType`
`STR`	`substructureType`

Constructor Summary

Constructors
Constructor	Description
`Structure(int modelIndex, STR structureType, STR substructureType, java.lang.String structureID, int serialID, int strandCount, BS[] bsAll)`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`static STR`	`getHelixType(int type)`
`void`	`set(int startChainID, int startSequenceNumber, char startInsertionCode, int endChainID, int endSequenceNumber, char endInsertionCode, int istart, int iend)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

structureType
```
public STR structureType
```

substructureType
```
public STR substructureType
```

structureID
```
public java.lang.String structureID
```

serialID
```
public int serialID
```

strandCount
```
public int strandCount
```

startSequenceNumber
```
public int startSequenceNumber
```

startChainID
```
public int startChainID
```

startChainStr
```
public java.lang.String startChainStr
```

startInsertionCode
```
public char startInsertionCode
```

endSequenceNumber
```
public int endSequenceNumber
```

endChainID
```
public int endChainID
```

endChainStr
```
public java.lang.String endChainStr
```

endInsertionCode
```
public char endInsertionCode
```

atomStartEnd
```
public int[] atomStartEnd
```

modelStartEnd
```
public int[] modelStartEnd
```

bsAll
```
public BS[] bsAll
```

Constructor Detail

Structure

public Structure(int modelIndex,
                 STR structureType,
                 STR substructureType,
                 java.lang.String structureID,
                 int serialID,
                 int strandCount,
                 BS[] bsAll)

Method Detail

getHelixType

public static STR getHelixType(int type)

set

public void set(int startChainID,
                int startSequenceNumber,
                char startInsertionCode,
                int endChainID,
                int endSequenceNumber,
                char endInsertionCode,
                int istart,
                int iend)

Class Structure

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

structureType

substructureType

structureID

serialID

strandCount

startSequenceNumber

startChainID

startChainStr

startInsertionCode

endSequenceNumber

endChainID

endChainStr

endInsertionCode

atomStartEnd

modelStartEnd

bsAll

Constructor Detail

Structure

Method Detail

getHelixType

set