index_manager.cpp File Reference

#include <iostream>
#include <vector>
#include <string>
#include <cstdio>
#include <vg/io/vpkg.hpp>
#include <vg/io/stream.hpp>
#include <bdsg/hash_graph.hpp>
#include <gbwtgraph/index.h>
#include "index_manager.hpp"
#include "utility.hpp"
#include "constructor.hpp"
#include "cactus_snarl_finder.hpp"
#include "haplotype_indexer.hpp"
#include "io/save_handle_graph.hpp"

Namespaces
	vg

Detailed Description

: implementations of common indexing functionality