sampler.hpp File Reference

#include <iostream>
#include <iomanip>
#include <map>
#include <unordered_map>
#include <vector>
#include <sstream>
#include <algorithm>
#include <chrono>
#include <ctime>
#include "vg.hpp"
#include "alignment.hpp"
#include "path.hpp"
#include "position.hpp"
#include "statistics.hpp"
#include "lru_cache.h"
#include "vg/io/json2pb.h"
#include "algorithms/subgraph.hpp"
#include "algorithms/alignment_path_offsets.hpp"
#include "algorithms/next_pos_chars.hpp"

Classes
class	vg::Sampler
class	vg::NGSSimulator
class	vg::NGSSimulator::MarkovDistribution< From, To >

Namespaces
	vg

Functions
pos_t	vg::position_at (PathPositionHandleGraph *xgidx, const string &path_name, const size_t &path_offset, bool is_reverse)