srpe.hpp File Reference

#include <string>
#include <cstdint>
#include <vcflib/Variant.h>
#include "filter.hpp"
#include "path_index.hpp"
#include <intervaltree/IntervalTree.h>
#include <vg/vg.pb.h>
#include "fml.h"
#include "vg.hpp"
#include <gcsa/gcsa.h>
#include "alignment.hpp"
#include "genotypekit.hpp"

Classes
struct	vg::BREAKPOINT
class	vg::DepthMap
class	vg::SRPE

Namespaces
	vg