vg::SnarlSeedClusterer::Seed Struct Reference

Seed information used in Giraffe. More...

#include <seed_clusterer.hpp>

Public Attributes
pos_t	pos
size_t	source
bool	is_top_level_node
size_t	component
size_t	offset
bool	is_top_level_snarl
size_t	snarl_rank
size_t	start_length
size_t	end_length
size_t	node_length
bool	rev_in_chain

Detailed Description

Seed information used in Giraffe.

Member Data Documentation

component

size_t vg::SnarlSeedClusterer::Seed::component

end_length

size_t vg::SnarlSeedClusterer::Seed::end_length

is_top_level_node

bool vg::SnarlSeedClusterer::Seed::is_top_level_node

is_top_level_snarl

bool vg::SnarlSeedClusterer::Seed::is_top_level_snarl

node_length

size_t vg::SnarlSeedClusterer::Seed::node_length

offset

size_t vg::SnarlSeedClusterer::Seed::offset

pos

pos_t vg::SnarlSeedClusterer::Seed::pos

rev_in_chain

bool vg::SnarlSeedClusterer::Seed::rev_in_chain

snarl_rank

size_t vg::SnarlSeedClusterer::Seed::snarl_rank

source

size_t vg::SnarlSeedClusterer::Seed::source

start_length

size_t vg::SnarlSeedClusterer::Seed::start_length

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The documentation for this struct was generated from the following file:

• src/seed_clusterer.hpp